Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824633.1_cds_XP_016502011.1_15693
CDS Infomation

[gene=LOC107820265] [db_xref=GeneID:107820265] [protein=protein sip5] [protein_id=XP_016502011.1] [location=complement(join(25057..25632,26140..26206,29869..29971,30049..30166,30296..30377,30488..30533,30646..30697,31257..31451))] [gbkey=CDS]
Sequence

ATGGGTAATAAGTTGGGAAGGAGGAAGCAAGTGGTGGATGACAAGTACACTAGGCCTCAG
GGGTTGTACCAACACAAGGATGTGGATATTAAGAAGCTTCGTAAACTCATTCTTGATTCC
AAGCTCGCGCCTTGCTATCCTGGTGATGATGATTGTCCCAACTCTGACCTCGAGGAATGC
CCCATTTGCTTCTTGTATTATCCTAGTTTAAACCGTTCAAGATGTTGCATGAAAGGCATT
TGTACAGAGTGTTTTTTGCAGATGAAGACCCCCAATTCAACCCGTCCAACACAATGCCCA
TTTTGTAAAACATCAAATTACGCGGTGGAATATCGCGGGGTTAAGACGAAGGAAGAAAAG
GGGATAGAGCAGATTGAGGAACAACGAGTTATAGAAGCCAAAATAAGGATGAGACAGCAG
GAGCTGCAGGATGAAGAAGAGAAAACGCAGAAACGAAAAGAGCTTAGTTCTTCCAGTAGT
ATCGCTGGACCAACACCATCTTTTGCTTCTGCTGTGGAAGGCGGAGAAGCCGTTACTTCT
CAAGAGACATGTGCAGCTTCAACAATTAGACAGCCTCAGCGCATGAGGCAGAATAGGGAG
GATGACTTTGACCTGGATCTTGAGGATATAATGGTTATGGAAGCCATATGGTTATCCATA
CAGGAGAATGGCAGAAATCGAACTATGGACTACAGTGATGTTGGTCCATCAGAACAATAT
ACAGCGGATCATCAATGTGTCCCAGAAGTCAATGCCCCTGCAGCTTCAGGATCATCTTCC
TCTCCTTCTGGCGGTCTTGCTTGTGCAATTGCAGCCCTTGCTGAGCGCCAGCAAATGGGT
GGAGAGCCCAGTAACTATAGTCGGAACATGTCATCGTACAATGAGCATCTTGCTTGTGAT
AGGTTTTCCAATAGGGAGGAGATAGAGAATGATGATTACTCTCATGCTGAGAGCACCATG
CATGTGTCACCTGAAAGGCAGCTGGAAATACCGAGGGACGATGGTGAGTGGGCTGATCAT
GGGTCCATGGTTGCTGAAGTTGGAACTAGTTATGCAGTCTCTGACGAAATGGAAGATGAT
GCTTCATTCCCTTTGCAAGGTGAAATGGTAAGTGATCTTCAACCCACCACCGGTTCAATA
GTTCCTGAGAATTTTGAAGAGCAGATGATGTTAGCCATGGCTGTTTCACTGGCTGAGGCA
AGCTCGCGGTCTAATCCACCTGGAGTGTCATGGCACTAG

Peptide Sequence

PEP ID

XP_016502011.1
PEP Infomation

PREDICTED: protein sip5 [Nicotiana tabacum]
Sequence

MGNKLGRRKQVVDDKYTRPQGLYQHKDVDIKKLRKLILDSKLAPCYPGDDDCPNSDLEEC
PICFLYYPSLNRSRCCMKGICTECFLQMKTPNSTRPTQCPFCKTSNYAVEYRGVKTKEEK
GIEQIEEQRVIEAKIRMRQQELQDEEEKTQKRKELSSSSSIAGPTPSFASAVEGGEAVTS
QETCAASTIRQPQRMRQNREDDFDLDLEDIMVMEAIWLSIQENGRNRTMDYSDVGPSEQY
TADHQCVPEVNAPAASGSSSSPSGGLACAIAALAERQQMGGEPSNYSRNMSSYNEHLACD
RFSNREEIENDDYSHAESTMHVSPERQLEIPRDDGEWADHGSMVAEVGTSYAVSDEMEDD
ASFPLQGEMVSDLQPTTGSIVPENFEEQMMLAMAVSLAEASSRSNPPGVSWH

Transcript Sequence

Gene sequence data has not been registered.